J6_6UCQ_003

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

6UCQ|1|2A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6UCQ|1|2A|G|44
6UCQ|1|2A|C|45
*
6UCQ|1|2A|G|179
6UCQ|1|2A|G|180
6UCQ|1|2A|A|181
6UCQ|1|2A|A|182
6UCQ|1|2A|C|183
*
6UCQ|1|2A|G|214
6UCQ|1|2A|G|215
6UCQ|1|2A|A|216
6UCQ|1|2A|G|217
6UCQ|1|2A|A|218
6UCQ|1|2A|G|219
6UCQ|1|2A|G|220
6UCQ|1|2A|A|221
6UCQ|1|2A|A|222
6UCQ|1|2A|A|223
6UCQ|1|2A|G|224
*
6UCQ|1|2A|C|231
6UCQ|1|2A|G|232
6UCQ|1|2A|A|233
6UCQ|1|2A|C|234
6UCQ|1|2A|U|235
*
6UCQ|1|2A|A|262
6UCQ|1|2A|C|263
6UCQ|1|2A|C|264
6UCQ|1|2A|A|265
6UCQ|1|2A|G|266
*
6UCQ|1|2A|C|426
6UCQ|1|2A|U|427
6UCQ|1|2A|A|428
6UCQ|1|2A|A|429
6UCQ|1|2A|G|430
6UCQ|1|2A|U|431
6UCQ|1|2A|A|432
6UCQ|1|2A|C|433

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 27

50S ribosomal protein L34