J6_6UZ7_001
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAAUAC*GGAAAAGAAAC*GGAUU*AAAAG*CUAAAUAUUGG*CAUC
- Length
- 42 nucleotides
- Bulged bases
- 6UZ7|1|5|A|67, 6UZ7|1|5|U|329, 6UZ7|1|8|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6UZ7|1|5|G|22
6UZ7|1|5|A|23
6UZ7|1|5|A|24
6UZ7|1|5|U|25
6UZ7|1|5|A|26
6UZ7|1|5|C|27
*
6UZ7|1|5|G|58
6UZ7|1|5|G|59
6UZ7|1|5|A|60
6UZ7|1|5|A|61
6UZ7|1|5|A|62
6UZ7|1|5|A|63
6UZ7|1|5|G|64
6UZ7|1|5|A|65
6UZ7|1|5|A|66
6UZ7|1|5|A|67
6UZ7|1|5|C|68
*
6UZ7|1|5|G|75
6UZ7|1|5|G|76
6UZ7|1|5|A|77
6UZ7|1|5|U|78
6UZ7|1|5|U|79
*
6UZ7|1|5|A|106
6UZ7|1|5|A|107
6UZ7|1|5|A|108
6UZ7|1|5|A|109
6UZ7|1|5|G|110
*
6UZ7|1|5|C|321
6UZ7|1|5|U|322
6UZ7|1|5|A|323
6UZ7|1|5|A|324
6UZ7|1|5|A|325
6UZ7|1|5|U|326
6UZ7|1|5|A|327
6UZ7|1|5|U|328
6UZ7|1|5|U|329
6UZ7|1|5|G|330
6UZ7|1|5|G|331
*
6UZ7|1|8|C|32
6UZ7|1|8|A|33
6UZ7|1|8|U|34
6UZ7|1|8|C|35
Current chains
- Chain 5
- 25S ribosomal RNA
- Chain 8
- 5.8S ribosomal RNA
Nearby chains
- Chain AC
- KLLA0B07139p
- Chain AL
- 60S ribosomal protein L13
- Chain AN
- Ribosomal protein L15
- Chain Bh
- KLLA0F05247p
- Chain Bi
- 60S ribosomal protein L36
- Chain Bj
- Ribosomal protein L37
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