J6_6V39_002
3D structure
- PDB id
- 6V39 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- UUUA*UUUG*CU*AGUA*UCUUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 6V39|1|AN1|U|2072, 6V39|1|AN1|A|2384, 6V39|1|AN1|U|2386, 6V39|1|AN1|G|2424, 6V39|1|AN1|A|2426, 6V39|1|AN1|U|2427, 6V39|1|AN1|A|2429
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6V39|1|AN1|U|2070
6V39|1|AN1|U|2071
6V39|1|AN1|U|2072
6V39|1|AN1|A|2073
*
6V39|1|AN1|U|2239
6V39|1|AN1|U|2240
6V39|1|AN1|U|2241
6V39|1|AN1|G|2242
*
6V39|1|AN1|C|2254
6V39|1|AN1|U|2255
*
6V39|1|AN1|A|2277
6V39|1|AN1|G|2278
6V39|1|AN1|U|2279
6V39|1|AN1|A|2280
*
6V39|1|AN1|U|2380
6V39|1|AN1|C|2381
6V39|1|AN1|U|2382
6V39|1|AN1|U|2383
6V39|1|AN1|A|2384
6V39|1|AN1|G|2385
6V39|1|AN1|U|2386
6V39|1|AN1|G|2387
6V39|1|AN1|A|2388
6V39|1|AN1|U|2389
6V39|1|AN1|C|2390
6V39|1|AN1|C|2391
*
6V39|1|AN1|G|2417
6V39|1|AN1|C|2418
6V39|1|AN1|U|2419
6V39|1|AN1|C|2420
6V39|1|AN1|A|2421
6V39|1|AN1|A|2422
6V39|1|AN1|C|2423
6V39|1|AN1|G|2424
6V39|1|AN1|G|2425
6V39|1|AN1|A|2426
6V39|1|AN1|U|2427
6V39|1|AN1|A|2428
6V39|1|AN1|A|2429
6V39|1|AN1|A|2430
6V39|1|AN1|A|2431
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L33
- Chain 2
- 50S ribosomal protein L35
- Chain C
- 50S ribosomal protein L2
- Chain K
- 50S ribosomal protein L15
- Chain V
- 50S ribosomal protein L27
- Chain W
- 50S ribosomal protein L28
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