J6_6WDD_001
3D structure
- PDB id
- 6WDD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 6WDD|1|1|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6WDD|1|1|G|45
6WDD|1|1|G|46
*
6WDD|1|1|C|179
6WDD|1|1|G|180
6WDD|1|1|A|181
6WDD|1|1|A|182
6WDD|1|1|C|183
*
6WDD|1|1|G|214
6WDD|1|1|G|215
6WDD|1|1|A|216
6WDD|1|1|A|217
6WDD|1|1|A|218
6WDD|1|1|A|219
6WDD|1|1|G|220
6WDD|1|1|A|221
6WDD|1|1|A|222
6WDD|1|1|A|223
6WDD|1|1|U|224
*
6WDD|1|1|A|231
6WDD|1|1|G|232
6WDD|1|1|A|233
6WDD|1|1|U|234
6WDD|1|1|U|235
*
6WDD|1|1|A|262
6WDD|1|1|G|263
6WDD|1|1|C|264
6WDD|1|1|A|265
6WDD|1|1|G|266
*
6WDD|1|1|C|426
6WDD|1|1|U|427
6WDD|1|1|A|428
6WDD|1|1|A|429
6WDD|1|1|A|430
6WDD|1|1|U|431
6WDD|1|1|A|432
6WDD|1|1|C|433
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L34
Coloring options: