J6_6WDF_001
3D structure
- PDB id
- 6WDF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 6WDF|1|1|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6WDF|1|1|G|45
6WDF|1|1|G|46
*
6WDF|1|1|C|179
6WDF|1|1|G|180
6WDF|1|1|A|181
6WDF|1|1|A|182
6WDF|1|1|C|183
*
6WDF|1|1|G|214
6WDF|1|1|G|215
6WDF|1|1|A|216
6WDF|1|1|A|217
6WDF|1|1|A|218
6WDF|1|1|A|219
6WDF|1|1|G|220
6WDF|1|1|A|221
6WDF|1|1|A|222
6WDF|1|1|A|223
6WDF|1|1|U|224
*
6WDF|1|1|A|231
6WDF|1|1|G|232
6WDF|1|1|A|233
6WDF|1|1|U|234
6WDF|1|1|U|235
*
6WDF|1|1|A|262
6WDF|1|1|G|263
6WDF|1|1|C|264
6WDF|1|1|A|265
6WDF|1|1|G|266
*
6WDF|1|1|C|426
6WDF|1|1|U|427
6WDF|1|1|A|428
6WDF|1|1|A|429
6WDF|1|1|A|430
6WDF|1|1|U|431
6WDF|1|1|A|432
6WDF|1|1|C|433
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L34
Coloring options: