J6_6WNW_001

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6WNW|1|4|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WNW|1|4|G|45
6WNW|1|4|G|46
*
6WNW|1|4|C|179
6WNW|1|4|G|180
6WNW|1|4|A|181
6WNW|1|4|A|182
6WNW|1|4|C|183
*
6WNW|1|4|G|214
6WNW|1|4|G|215
6WNW|1|4|A|216
6WNW|1|4|A|217
6WNW|1|4|A|218
6WNW|1|4|A|219
6WNW|1|4|G|220
6WNW|1|4|A|221
6WNW|1|4|A|222
6WNW|1|4|A|223
6WNW|1|4|U|224
*
6WNW|1|4|A|231
6WNW|1|4|G|232
6WNW|1|4|A|233
6WNW|1|4|U|234
6WNW|1|4|U|235
*
6WNW|1|4|A|262
6WNW|1|4|G|263
6WNW|1|4|C|264
6WNW|1|4|A|265
6WNW|1|4|G|266
*
6WNW|1|4|C|426
6WNW|1|4|U|427
6WNW|1|4|A|428
6WNW|1|4|A|429
6WNW|1|4|A|430
6WNW|1|4|U|431
6WNW|1|4|A|432
6WNW|1|4|C|433

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L34