J6_6WNW_002
3D structure
- PDB id
- 6WNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUA*UUUG*CU*AGCA*UCAUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 6WNW|1|4|U|2204, 6WNW|1|4|G|2556, 6WNW|1|4|A|2558, 6WNW|1|4|U|2559
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6WNW|1|4|U|2202
6WNW|1|4|U|2203
6WNW|1|4|U|2204
6WNW|1|4|A|2205
*
6WNW|1|4|U|2371
6WNW|1|4|U|2372
6WNW|1|4|U|2373
6WNW|1|4|G|2374
*
6WNW|1|4|C|2386
6WNW|1|4|U|2387
*
6WNW|1|4|A|2409
6WNW|1|4|G|2410
6WNW|1|4|C|2411
6WNW|1|4|A|2412
*
6WNW|1|4|U|2512
6WNW|1|4|C|2513
6WNW|1|4|A|2514
6WNW|1|4|U|2515
6WNW|1|4|A|2516
6WNW|1|4|G|2517
6WNW|1|4|U|2518
6WNW|1|4|G|2519
6WNW|1|4|A|2520
6WNW|1|4|U|2521
6WNW|1|4|C|2522
6WNW|1|4|C|2523
*
6WNW|1|4|G|2549
6WNW|1|4|C|2550
6WNW|1|4|U|2551
6WNW|1|4|C|2552
6WNW|1|4|A|2553
6WNW|1|4|A|2554
6WNW|1|4|C|2555
6WNW|1|4|G|2556
6WNW|1|4|G|2557
6WNW|1|4|A|2558
6WNW|1|4|U|2559
6WNW|1|4|A|2560
6WNW|1|4|A|2561
6WNW|1|4|A|2562
6WNW|1|4|A|2563
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L33
- Chain E
- 50S ribosomal protein L35
- Chain b
- 50S ribosomal protein L2
- Chain l
- 50S ribosomal protein L15
- Chain w
- 50S ribosomal protein L27
- Chain x
- 50S ribosomal protein L28
Coloring options: