Loop J6_6WRU

3D structure

PDB id: 6WRU (explore in PDB, NAKB, or RNA 3D Hub)
Description: Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

Loop

Sequence: UUUA*UUUG*CG*CGCU*ACUUAGUGAUCC*GCUCAACGGAUAAAA
Length: 41 nucleotides
Bulged bases: 6WRU|1|1|U|2103, 6WRU|1|1|U|2417, 6WRU|1|1|G|2455, 6WRU|1|1|A|2457, 6WRU|1|1|U|2458
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6WRU|1|1|U|2101
6WRU|1|1|U|2102
6WRU|1|1|U|2103
6WRU|1|1|A|2104
*
6WRU|1|1|U|2270
6WRU|1|1|U|2271
6WRU|1|1|U|2272
6WRU|1|1|G|2273
*
6WRU|1|1|C|2285
6WRU|1|1|G|2286
*
6WRU|1|1|C|2308
6WRU|1|1|G|2309
6WRU|1|1|C|2310
6WRU|1|1|U|2311
*
6WRU|1|1|A|2411
6WRU|1|1|C|2412
6WRU|1|1|U|2413
6WRU|1|1|U|2414
6WRU|1|1|A|2415
6WRU|1|1|G|2416
6WRU|1|1|U|2417
6WRU|1|1|G|2418
6WRU|1|1|A|2419
6WRU|1|1|U|2420
6WRU|1|1|C|2421
6WRU|1|1|C|2422
*
6WRU|1|1|G|2448
6WRU|1|1|C|2449
6WRU|1|1|U|2450
6WRU|1|1|C|2451
6WRU|1|1|A|2452
6WRU|1|1|A|2453
6WRU|1|1|C|2454
6WRU|1|1|G|2455
6WRU|1|1|G|2456
6WRU|1|1|A|2457
6WRU|1|1|U|2458
6WRU|1|1|A|2459
6WRU|1|1|A|2460
6WRU|1|1|A|2461
6WRU|1|1|A|2462

Current chains

Chain 1: 23S rRNA

Nearby chains

Chain B: 50S ribosomal protein L2
Chain I: 50S ribosomal protein L27
Chain J: 50S ribosomal protein L28
Chain O: 50S ribosomal protein L33
Chain Q: 50S ribosomal protein L35
Chain X: 50S ribosomal protein L15

J6_6WRU_002