J6_6WYV_002

3D structure

PDB id

6WYV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compounds 47 and VS1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6WYV|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WYV|1|I|G|45
6WYV|1|I|G|46
*
6WYV|1|I|C|179
6WYV|1|I|G|180
6WYV|1|I|A|181
6WYV|1|I|A|182
6WYV|1|I|C|183
*
6WYV|1|I|G|214
6WYV|1|I|G|215
6WYV|1|I|A|216
6WYV|1|I|A|217
6WYV|1|I|A|218
6WYV|1|I|A|219
6WYV|1|I|G|220
6WYV|1|I|A|221
6WYV|1|I|A|222
6WYV|1|I|A|223
6WYV|1|I|U|224
*
6WYV|1|I|A|231
6WYV|1|I|G|232
6WYV|1|I|A|233
6WYV|1|I|U|234
6WYV|1|I|U|235
*
6WYV|1|I|A|262
6WYV|1|I|G|263
6WYV|1|I|C|264
6WYV|1|I|A|265
6WYV|1|I|G|266
*
6WYV|1|I|C|426
6WYV|1|I|U|427
6WYV|1|I|A|428
6WYV|1|I|A|429
6WYV|1|I|A|430
6WYV|1|I|U|431
6WYV|1|I|A|432
6WYV|1|I|C|433

Current chains

Chain I

23S ribosomal RNA

Nearby chains