J6_6XHY_003

3D structure

PDB id

6XHY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

6XHY|1|2A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XHY|1|2A|G|44
6XHY|1|2A|C|45
*
6XHY|1|2A|G|179
6XHY|1|2A|G|180
6XHY|1|2A|A|181
6XHY|1|2A|A|182
6XHY|1|2A|C|183
*
6XHY|1|2A|G|214
6XHY|1|2A|G|215
6XHY|1|2A|A|216
6XHY|1|2A|G|217
6XHY|1|2A|A|218
6XHY|1|2A|G|219
6XHY|1|2A|G|220
6XHY|1|2A|A|221
6XHY|1|2A|A|222
6XHY|1|2A|A|223
6XHY|1|2A|G|224
*
6XHY|1|2A|C|231
6XHY|1|2A|G|232
6XHY|1|2A|A|233
6XHY|1|2A|C|234
6XHY|1|2A|U|235
*
6XHY|1|2A|A|262
6XHY|1|2A|C|263
6XHY|1|2A|C|264
6XHY|1|2A|A|265
6XHY|1|2A|G|266
*
6XHY|1|2A|C|426
6XHY|1|2A|U|427
6XHY|1|2A|A|428
6XHY|1|2A|A|429
6XHY|1|2A|G|430
6XHY|1|2A|U|431
6XHY|1|2A|A|432
6XHY|1|2A|C|433

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 27

50S ribosomal protein L34