J6_6YSI_001
3D structure
- PDB id
- 6YSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AUCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 6YSI|1|1|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YSI|1|1|G|45
6YSI|1|1|G|46
*
6YSI|1|1|C|179
6YSI|1|1|G|180
6YSI|1|1|A|181
6YSI|1|1|A|182
6YSI|1|1|C|183
*
6YSI|1|1|G|214
6YSI|1|1|G|215
6YSI|1|1|A|216
6YSI|1|1|A|217
6YSI|1|1|A|218
6YSI|1|1|A|219
6YSI|1|1|G|220
6YSI|1|1|A|221
6YSI|1|1|A|222
6YSI|1|1|A|223
6YSI|1|1|U|224
*
6YSI|1|1|A|231
6YSI|1|1|G|232
6YSI|1|1|A|233
6YSI|1|1|U|234
6YSI|1|1|U|235
*
6YSI|1|1|A|262
6YSI|1|1|U|263
6YSI|1|1|C|264
6YSI|1|1|A|265
6YSI|1|1|G|266
*
6YSI|1|1|C|418
6YSI|1|1|U|419
6YSI|1|1|A|420
6YSI|1|1|A|421
6YSI|1|1|A|422
6YSI|1|1|U|423
6YSI|1|1|A|424
6YSI|1|1|C|425
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain Z
- 50S ribosomal protein L34
Coloring options: