J6_6YSR_001

3D structure

PDB id

6YSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+9 stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6YSR|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YSR|1|A|G|45
6YSR|1|A|G|46
*
6YSR|1|A|C|179
6YSR|1|A|G|180
6YSR|1|A|A|181
6YSR|1|A|A|182
6YSR|1|A|C|183
*
6YSR|1|A|G|214
6YSR|1|A|G|215
6YSR|1|A|A|216
6YSR|1|A|A|217
6YSR|1|A|A|218
6YSR|1|A|A|219
6YSR|1|A|G|220
6YSR|1|A|A|221
6YSR|1|A|A|222
6YSR|1|A|A|223
6YSR|1|A|U|224
*
6YSR|1|A|A|231
6YSR|1|A|G|232
6YSR|1|A|A|233
6YSR|1|A|U|234
6YSR|1|A|U|235
*
6YSR|1|A|A|262
6YSR|1|A|G|263
6YSR|1|A|C|264
6YSR|1|A|A|265
6YSR|1|A|G|266
*
6YSR|1|A|C|426
6YSR|1|A|U|427
6YSR|1|A|A|428
6YSR|1|A|A|429
6YSR|1|A|A|430
6YSR|1|A|U|431
6YSR|1|A|A|432
6YSR|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34