J6_6YSU_001

3D structure

PDB id

6YSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6YSU|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YSU|1|A|G|45
6YSU|1|A|G|46
*
6YSU|1|A|C|179
6YSU|1|A|G|180
6YSU|1|A|A|181
6YSU|1|A|A|182
6YSU|1|A|C|183
*
6YSU|1|A|G|214
6YSU|1|A|G|215
6YSU|1|A|A|216
6YSU|1|A|A|217
6YSU|1|A|A|218
6YSU|1|A|A|219
6YSU|1|A|G|220
6YSU|1|A|A|221
6YSU|1|A|A|222
6YSU|1|A|A|223
6YSU|1|A|U|224
*
6YSU|1|A|A|231
6YSU|1|A|G|232
6YSU|1|A|A|233
6YSU|1|A|U|234
6YSU|1|A|U|235
*
6YSU|1|A|A|262
6YSU|1|A|G|263
6YSU|1|A|C|264
6YSU|1|A|A|265
6YSU|1|A|G|266
*
6YSU|1|A|C|426
6YSU|1|A|U|427
6YSU|1|A|A|428
6YSU|1|A|A|429
6YSU|1|A|A|430
6YSU|1|A|U|431
6YSU|1|A|A|432
6YSU|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34