J6_6ZTM_001

3D structure

PDB id

6ZTM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state without NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6ZTM|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZTM|1|BA|G|45
6ZTM|1|BA|G|46
*
6ZTM|1|BA|C|179
6ZTM|1|BA|G|180
6ZTM|1|BA|A|181
6ZTM|1|BA|A|182
6ZTM|1|BA|C|183
*
6ZTM|1|BA|G|214
6ZTM|1|BA|G|215
6ZTM|1|BA|A|216
6ZTM|1|BA|A|217
6ZTM|1|BA|A|218
6ZTM|1|BA|A|219
6ZTM|1|BA|G|220
6ZTM|1|BA|A|221
6ZTM|1|BA|A|222
6ZTM|1|BA|A|223
6ZTM|1|BA|U|224
*
6ZTM|1|BA|A|231
6ZTM|1|BA|G|232
6ZTM|1|BA|A|233
6ZTM|1|BA|U|234
6ZTM|1|BA|U|235
*
6ZTM|1|BA|A|262
6ZTM|1|BA|G|263
6ZTM|1|BA|C|264
6ZTM|1|BA|A|265
6ZTM|1|BA|G|266
*
6ZTM|1|BA|C|426
6ZTM|1|BA|U|427
6ZTM|1|BA|A|428
6ZTM|1|BA|A|429
6ZTM|1|BA|A|430
6ZTM|1|BA|U|431
6ZTM|1|BA|A|432
6ZTM|1|BA|C|433

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L34