J6_6ZTN_001

3D structure

PDB id

6ZTN (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

6ZTN|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZTN|1|BA|G|45
6ZTN|1|BA|G|46
*
6ZTN|1|BA|C|179
6ZTN|1|BA|G|180
6ZTN|1|BA|A|181
6ZTN|1|BA|A|182
6ZTN|1|BA|C|183
*
6ZTN|1|BA|G|214
6ZTN|1|BA|G|215
6ZTN|1|BA|A|216
6ZTN|1|BA|A|217
6ZTN|1|BA|A|218
6ZTN|1|BA|A|219
6ZTN|1|BA|G|220
6ZTN|1|BA|A|221
6ZTN|1|BA|A|222
6ZTN|1|BA|A|223
6ZTN|1|BA|U|224
*
6ZTN|1|BA|A|231
6ZTN|1|BA|G|232
6ZTN|1|BA|A|233
6ZTN|1|BA|U|234
6ZTN|1|BA|U|235
*
6ZTN|1|BA|A|262
6ZTN|1|BA|G|263
6ZTN|1|BA|C|264
6ZTN|1|BA|A|265
6ZTN|1|BA|G|266
*
6ZTN|1|BA|C|426
6ZTN|1|BA|U|427
6ZTN|1|BA|A|428
6ZTN|1|BA|A|429
6ZTN|1|BA|A|430
6ZTN|1|BA|U|431
6ZTN|1|BA|A|432
6ZTN|1|BA|C|433

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L34