J6_7A0S_002
3D structure
- PDB id
- 7A0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S Deinococcus radiodurans ribosome bounded with mycinamicin I
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.22 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GCUUAGUGAACC*GAUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 7A0S|1|X|U|2059, 7A0S|1|X|A|2367, 7A0S|1|X|U|2369, 7A0S|1|X|G|2407, 7A0S|1|X|A|2409, 7A0S|1|X|U|2410
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J6_64525.1
- Basepair signature
- cWW-cWH-cWH-F-cWW-F-F-tSS-F-cWW-cWW-F-F-cWW-F-F-tHW-F-cWW-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7A0S|1|X|U|2057
7A0S|1|X|U|2058
7A0S|1|X|U|2059
7A0S|1|X|A|2060
*
7A0S|1|X|U|2222
7A0S|1|X|U|2223
7A0S|1|X|U|2224
7A0S|1|X|G|2225
*
7A0S|1|X|C|2237
7A0S|1|X|G|2238
*
7A0S|1|X|C|2260
7A0S|1|X|G|2261
7A0S|1|X|C|2262
7A0S|1|X|C|2263
*
7A0S|1|X|G|2363
7A0S|1|X|C|2364
7A0S|1|X|U|2365
7A0S|1|X|U|2366
7A0S|1|X|A|2367
7A0S|1|X|G|2368
7A0S|1|X|U|2369
7A0S|1|X|G|2370
7A0S|1|X|A|2371
7A0S|1|X|A|2372
7A0S|1|X|C|2373
7A0S|1|X|C|2374
*
7A0S|1|X|G|2400
7A0S|1|X|A|2401
7A0S|1|X|U|2402
7A0S|1|X|C|2403
7A0S|1|X|A|2404
7A0S|1|X|A|2405
7A0S|1|X|C|2406
7A0S|1|X|G|2407
7A0S|1|X|G|2408
7A0S|1|X|A|2409
7A0S|1|X|U|2410
7A0S|1|X|A|2411
7A0S|1|X|A|2412
7A0S|1|X|A|2413
7A0S|1|X|A|2414
Current chains
- Chain X
- RNA (2732-MER)
Nearby chains
- Chain 1
- 50S ribosomal protein L33
- Chain 3
- 50S ribosomal protein L35
- Chain A
- 50S ribosomal protein L2
- Chain I
- 50S ribosomal protein L15
- Chain T
- 50S ribosomal protein L27
- Chain U
- 50S ribosomal protein L28
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