J6_7ACR_002
3D structure
- PDB id
- 7ACR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of post-translocated trans-translation complex on E. coli stalled ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.44 Å
Loop
- Sequence
- GUGCAUGCCG*CGUAAAAAGCCGCAAAAAAUAGUCGCAAACGACGAAAACUACG*CC*GGUCAAACCCAAAAGAGAUCGC*GUUAAAACUUAAUCAGGCUAGUUU*AAGCGAAUGUAAAGACUGACUAAGCAUGUAGUAC
- Length
- 135 nucleotides
- Bulged bases
- 7ACR|1|4|U|68, 7ACR|1|4|A|79, 7ACR|1|4|A|80, 7ACR|1|4|A|81, 7ACR|1|4|A|82, 7ACR|1|4|U|85, 7ACR|1|4|A|94, 7ACR|1|4|A|97, 7ACR|1|4|C|98, 7ACR|1|4|G|99, 7ACR|1|4|A|100, 7ACR|1|4|A|101, 7ACR|1|4|A|102, 7ACR|1|4|A|103, 7ACR|1|4|C|104, 7ACR|1|4|U|105, 7ACR|1|4|A|106, 7ACR|1|4|U|182, 7ACR|1|4|C|183, 7ACR|1|4|A|184, 7ACR|1|4|C|189, 7ACR|1|4|A|192, 7ACR|1|4|U|236, 7ACR|1|4|U|237, 7ACR|1|4|A|238, 7ACR|1|4|A|239, 7ACR|1|4|U|240, 7ACR|1|4|G|244, 7ACR|1|4|C|245, 7ACR|1|4|U|249, 7ACR|1|4|U|250, 7ACR|1|4|A|281, 7ACR|1|4|C|283, 7ACR|1|4|G|284, 7ACR|1|4|A|285, 7ACR|1|4|A|294, 7ACR|1|4|C|295, 7ACR|1|4|U|296, 7ACR|1|4|C|299, 7ACR|1|4|C|304, 7ACR|1|4|A|309
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ACR|1|4|G|41
7ACR|1|4|U|42
7ACR|1|4|G|43
7ACR|1|4|C|44
7ACR|1|4|A|45
7ACR|1|4|U|46
7ACR|1|4|G|47
7ACR|1|4|C|48
7ACR|1|4|C|49
7ACR|1|4|G|50
*
7ACR|1|4|C|66
7ACR|1|4|G|67
7ACR|1|4|U|68
7ACR|1|4|A|69
7ACR|1|4|A|70
7ACR|1|4|A|71
7ACR|1|4|A|72
7ACR|1|4|A|73
7ACR|1|4|G|74
7ACR|1|4|C|75
7ACR|1|4|C|76
7ACR|1|4|G|77
7ACR|1|4|C|78
7ACR|1|4|A|79
7ACR|1|4|A|80
7ACR|1|4|A|81
7ACR|1|4|A|82
7ACR|1|4|A|83
7ACR|1|4|A|84
7ACR|1|4|U|85
7ACR|1|4|A|86
7ACR|1|4|G|87
7ACR|1|4|U|88
7ACR|1|4|C|89
7ACR|1|4|G|90
7ACR|1|4|C|91
7ACR|1|4|A|92
7ACR|1|4|A|93
7ACR|1|4|A|94
7ACR|1|4|C|95
7ACR|1|4|G|96
7ACR|1|4|A|97
7ACR|1|4|C|98
7ACR|1|4|G|99
7ACR|1|4|A|100
7ACR|1|4|A|101
7ACR|1|4|A|102
7ACR|1|4|A|103
7ACR|1|4|C|104
7ACR|1|4|U|105
7ACR|1|4|A|106
7ACR|1|4|C|107
7ACR|1|4|G|108
*
7ACR|1|4|C|138
7ACR|1|4|C|139
*
7ACR|1|4|G|180
7ACR|1|4|G|181
7ACR|1|4|U|182
7ACR|1|4|C|183
7ACR|1|4|A|184
7ACR|1|4|A|185
7ACR|1|4|A|186
7ACR|1|4|C|187
7ACR|1|4|C|188
7ACR|1|4|C|189
7ACR|1|4|A|190
7ACR|1|4|A|191
7ACR|1|4|A|192
7ACR|1|4|A|193
7ACR|1|4|G|194
7ACR|1|4|A|195
7ACR|1|4|G|196
7ACR|1|4|A|197
7ACR|1|4|U|198
7ACR|1|4|C|199
7ACR|1|4|G|200
7ACR|1|4|C|201
*
7ACR|1|4|G|228
7ACR|1|4|U|229
7ACR|1|4|U|230
7ACR|1|4|A|231
7ACR|1|4|A|232
7ACR|1|4|A|233
7ACR|1|4|A|234
7ACR|1|4|C|235
7ACR|1|4|U|236
7ACR|1|4|U|237
7ACR|1|4|A|238
7ACR|1|4|A|239
7ACR|1|4|U|240
7ACR|1|4|C|241
7ACR|1|4|A|242
7ACR|1|4|G|243
7ACR|1|4|G|244
7ACR|1|4|C|245
7ACR|1|4|U|246
7ACR|1|4|A|247
7ACR|1|4|G|248
7ACR|1|4|U|249
7ACR|1|4|U|250
7ACR|1|4|U|251
*
7ACR|1|4|A|280
7ACR|1|4|A|281
7ACR|1|4|G|282
7ACR|1|4|C|283
7ACR|1|4|G|284
7ACR|1|4|A|285
7ACR|1|4|A|286
7ACR|1|4|U|287
7ACR|1|4|G|288
7ACR|1|4|U|289
7ACR|1|4|A|290
7ACR|1|4|A|291
7ACR|1|4|A|292
7ACR|1|4|G|293
7ACR|1|4|A|294
7ACR|1|4|C|295
7ACR|1|4|U|296
7ACR|1|4|G|297
7ACR|1|4|A|298
7ACR|1|4|C|299
7ACR|1|4|U|300
7ACR|1|4|A|301
7ACR|1|4|A|302
7ACR|1|4|G|303
7ACR|1|4|C|304
7ACR|1|4|A|305
7ACR|1|4|U|306
7ACR|1|4|G|307
7ACR|1|4|U|308
7ACR|1|4|A|309
7ACR|1|4|G|310
7ACR|1|4|U|311
7ACR|1|4|A|312
7ACR|1|4|C|313
Current chains
- Chain 4
- transfer-messenger RNA (tmRNA)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 5
- SsrA-binding protein
- Chain h
- 30S ribosomal protein S3
- Chain i
- 30S ribosomal protein S4
- Chain j
- 30S ribosomal protein S5
- Chain o
- 30S ribosomal protein S10
- Chain x
- 30S ribosomal protein S19
Coloring options: