3D structure

PDB id
7AS8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GC*GCAGAC*GGAAGAGAAAG*CGAUU*AUCAG*CUAAAUAC
Length
37 nucleotides
Bulged bases
7AS8|1|A|G|184, 7AS8|1|A|A|226
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7AS8|1|A|G|45
7AS8|1|A|C|46
*
7AS8|1|A|G|181
7AS8|1|A|C|182
7AS8|1|A|A|183
7AS8|1|A|G|184
7AS8|1|A|A|185
7AS8|1|A|C|186
*
7AS8|1|A|G|217
7AS8|1|A|G|218
7AS8|1|A|A|219
7AS8|1|A|A|220
7AS8|1|A|G|221
7AS8|1|A|A|222
7AS8|1|A|G|223
7AS8|1|A|A|224
7AS8|1|A|A|225
7AS8|1|A|A|226
7AS8|1|A|G|227
*
7AS8|1|A|C|234
7AS8|1|A|G|235
7AS8|1|A|A|236
7AS8|1|A|U|237
7AS8|1|A|U|238
*
7AS8|1|A|A|265
7AS8|1|A|U|266
7AS8|1|A|C|267
7AS8|1|A|A|268
7AS8|1|A|G|269
*
7AS8|1|A|C|473
7AS8|1|A|U|474
7AS8|1|A|A|475
7AS8|1|A|A|476
7AS8|1|A|A|477
7AS8|1|A|U|478
7AS8|1|A|A|479
7AS8|1|A|C|480

Current chains

Chain A
23S rRNA

Nearby chains

Chain G
50S ribosomal protein L4
Chain h
50S ribosomal protein L34

Coloring options:

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