J6_7B7D_001
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GAGUAC*GGAAAAGAAAC*GGAUU*AAAAG*CUAAAUAUUGG*CAUC
- Length
- 42 nucleotides
- Bulged bases
- 7B7D|1|LA|A|67, 7B7D|1|LA|U|329, 7B7D|1|LC|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7B7D|1|LA|G|22
7B7D|1|LA|A|23
7B7D|1|LA|G|24
7B7D|1|LA|U|25
7B7D|1|LA|A|26
7B7D|1|LA|C|27
*
7B7D|1|LA|G|58
7B7D|1|LA|G|59
7B7D|1|LA|A|60
7B7D|1|LA|A|61
7B7D|1|LA|A|62
7B7D|1|LA|A|63
7B7D|1|LA|G|64
7B7D|1|LA|A|65
7B7D|1|LA|A|66
7B7D|1|LA|A|67
7B7D|1|LA|C|68
*
7B7D|1|LA|G|75
7B7D|1|LA|G|76
7B7D|1|LA|A|77
7B7D|1|LA|U|78
7B7D|1|LA|U|79
*
7B7D|1|LA|A|106
7B7D|1|LA|A|107
7B7D|1|LA|A|108
7B7D|1|LA|A|109
7B7D|1|LA|G|110
*
7B7D|1|LA|C|321
7B7D|1|LA|U|322
7B7D|1|LA|A|323
7B7D|1|LA|A|324
7B7D|1|LA|A|325
7B7D|1|LA|U|326
7B7D|1|LA|A|327
7B7D|1|LA|U|328
7B7D|1|LA|U|329
7B7D|1|LA|G|330
7B7D|1|LA|G|331
*
7B7D|1|LC|C|32
7B7D|1|LC|A|33
7B7D|1|LC|U|34
7B7D|1|LC|C|35
Current chains
- Chain LA
- 25S rRNA
- Chain LC
- 5.8S rRNA
Nearby chains
- Chain LF
- 60S ribosomal protein L4-A
- Chain LN
- 60S ribosomal protein L13-A
- Chain LP
- 60S ribosomal protein L15-A
- Chain Ld
- 60S ribosomal protein L35-A
- Chain Le
- 60S ribosomal protein L36-A
- Chain Lf
- 60S ribosomal protein L37-A
Coloring options: