J6_7BL2_001

3D structure

PDB id

7BL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7BL2|1|A|A|223, 7BL2|1|A|C|264

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BL2|1|A|G|45
7BL2|1|A|G|46
*
7BL2|1|A|C|179
7BL2|1|A|G|180
7BL2|1|A|A|181
7BL2|1|A|A|182
7BL2|1|A|C|183
*
7BL2|1|A|G|214
7BL2|1|A|G|215
7BL2|1|A|A|216
7BL2|1|A|A|217
7BL2|1|A|A|218
7BL2|1|A|A|219
7BL2|1|A|G|220
7BL2|1|A|A|221
7BL2|1|A|A|222
7BL2|1|A|A|223
7BL2|1|A|U|224
*
7BL2|1|A|A|231
7BL2|1|A|G|232
7BL2|1|A|A|233
7BL2|1|A|U|234
7BL2|1|A|U|235
*
7BL2|1|A|A|262
7BL2|1|A|G|263
7BL2|1|A|C|264
7BL2|1|A|A|265
7BL2|1|A|G|266
*
7BL2|1|A|C|426
7BL2|1|A|U|427
7BL2|1|A|A|428
7BL2|1|A|A|429
7BL2|1|A|A|430
7BL2|1|A|U|431
7BL2|1|A|A|432
7BL2|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34