Loop J6_7BL2

3D structure

PDB id: 7BL2 (explore in PDB, NAKB, or RNA 3D Hub)
Description: pre-50S-ObgE particle state 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å

Loop

Sequence: UUUA*UUUG*CU*AGCA*UCAUAGUGAUCC*GCUCAACGGAUAAAA
Length: 41 nucleotides
Bulged bases: 7BL2|1|A|U|2076, 7BL2|1|A|A|2388, 7BL2|1|A|U|2390, 7BL2|1|A|G|2428, 7BL2|1|A|A|2430, 7BL2|1|A|U|2431, 7BL2|1|A|A|2432, 7BL2|1|A|A|2433, 7BL2|1|A|A|2434
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7BL2|1|A|U|2074
7BL2|1|A|U|2075
7BL2|1|A|U|2076
7BL2|1|A|A|2077
*
7BL2|1|A|U|2243
7BL2|1|A|U|2244
7BL2|1|A|U|2245
7BL2|1|A|G|2246
*
7BL2|1|A|C|2258
7BL2|1|A|U|2259
*
7BL2|1|A|A|2281
7BL2|1|A|G|2282
7BL2|1|A|C|2283
7BL2|1|A|A|2284
*
7BL2|1|A|U|2384
7BL2|1|A|C|2385
7BL2|1|A|A|2386
7BL2|1|A|U|2387
7BL2|1|A|A|2388
7BL2|1|A|G|2389
7BL2|1|A|U|2390
7BL2|1|A|G|2391
7BL2|1|A|A|2392
7BL2|1|A|U|2393
7BL2|1|A|C|2394
7BL2|1|A|C|2395
*
7BL2|1|A|G|2421
7BL2|1|A|C|2422
7BL2|1|A|U|2423
7BL2|1|A|C|2424
7BL2|1|A|A|2425
7BL2|1|A|A|2426
7BL2|1|A|C|2427
7BL2|1|A|G|2428
7BL2|1|A|G|2429
7BL2|1|A|A|2430
7BL2|1|A|U|2431
7BL2|1|A|A|2432
7BL2|1|A|A|2433
7BL2|1|A|A|2434
7BL2|1|A|A|2435

Current chains

Chain A: 23S ribosomal RNA

Nearby chains

Chain 1: 50S ribosomal protein L33
Chain C: 50S ribosomal protein L2
Chain L: 50S ribosomal protein L15
Chain W: 50S ribosomal protein L27
Chain X: 50S ribosomal protein L28

J6_7BL2_002