J6_7BL3_001

3D structure

PDB id

7BL3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAUC*GAGAUU*AGCAG*CUAAAUAC

Length

38 nucleotides

Bulged bases

7BL3|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BL3|1|A|G|45
7BL3|1|A|G|46
*
7BL3|1|A|C|179
7BL3|1|A|G|180
7BL3|1|A|A|181
7BL3|1|A|A|182
7BL3|1|A|C|183
*
7BL3|1|A|G|214
7BL3|1|A|G|215
7BL3|1|A|A|216
7BL3|1|A|A|217
7BL3|1|A|A|218
7BL3|1|A|A|219
7BL3|1|A|G|220
7BL3|1|A|A|221
7BL3|1|A|A|222
7BL3|1|A|A|223
7BL3|1|A|U|224
7BL3|1|A|C|225
*
7BL3|1|A|G|230
7BL3|1|A|A|231
7BL3|1|A|G|232
7BL3|1|A|A|233
7BL3|1|A|U|234
7BL3|1|A|U|235
*
7BL3|1|A|A|262
7BL3|1|A|G|263
7BL3|1|A|C|264
7BL3|1|A|A|265
7BL3|1|A|G|266
*
7BL3|1|A|C|426
7BL3|1|A|U|427
7BL3|1|A|A|428
7BL3|1|A|A|429
7BL3|1|A|A|430
7BL3|1|A|U|431
7BL3|1|A|A|432
7BL3|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34