J6_7BL4_001

3D structure

PDB id

7BL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7BL4|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BL4|1|A|G|45
7BL4|1|A|G|46
*
7BL4|1|A|C|179
7BL4|1|A|G|180
7BL4|1|A|A|181
7BL4|1|A|A|182
7BL4|1|A|C|183
*
7BL4|1|A|G|214
7BL4|1|A|G|215
7BL4|1|A|A|216
7BL4|1|A|A|217
7BL4|1|A|A|218
7BL4|1|A|A|219
7BL4|1|A|G|220
7BL4|1|A|A|221
7BL4|1|A|A|222
7BL4|1|A|A|223
7BL4|1|A|U|224
*
7BL4|1|A|A|231
7BL4|1|A|G|232
7BL4|1|A|A|233
7BL4|1|A|U|234
7BL4|1|A|U|235
*
7BL4|1|A|A|262
7BL4|1|A|G|263
7BL4|1|A|C|264
7BL4|1|A|A|265
7BL4|1|A|G|266
*
7BL4|1|A|C|426
7BL4|1|A|U|427
7BL4|1|A|A|428
7BL4|1|A|A|429
7BL4|1|A|A|430
7BL4|1|A|U|431
7BL4|1|A|A|432
7BL4|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34