J6_7BL5_001

3D structure

PDB id

7BL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7BL5|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BL5|1|A|G|45
7BL5|1|A|G|46
*
7BL5|1|A|C|179
7BL5|1|A|G|180
7BL5|1|A|A|181
7BL5|1|A|A|182
7BL5|1|A|C|183
*
7BL5|1|A|G|214
7BL5|1|A|G|215
7BL5|1|A|A|216
7BL5|1|A|A|217
7BL5|1|A|A|218
7BL5|1|A|A|219
7BL5|1|A|G|220
7BL5|1|A|A|221
7BL5|1|A|A|222
7BL5|1|A|A|223
7BL5|1|A|U|224
*
7BL5|1|A|A|231
7BL5|1|A|G|232
7BL5|1|A|A|233
7BL5|1|A|U|234
7BL5|1|A|U|235
*
7BL5|1|A|A|262
7BL5|1|A|G|263
7BL5|1|A|C|264
7BL5|1|A|A|265
7BL5|1|A|G|266
*
7BL5|1|A|C|426
7BL5|1|A|U|427
7BL5|1|A|A|428
7BL5|1|A|A|429
7BL5|1|A|A|430
7BL5|1|A|U|431
7BL5|1|A|A|432
7BL5|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34