J6_7CPJ_001

3D structure

PDB id

7CPJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

ycbZ-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7CPJ|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7CPJ|1|A|G|45
7CPJ|1|A|G|46
*
7CPJ|1|A|C|179
7CPJ|1|A|G|180
7CPJ|1|A|A|181
7CPJ|1|A|A|182
7CPJ|1|A|C|183
*
7CPJ|1|A|G|214
7CPJ|1|A|G|215
7CPJ|1|A|A|216
7CPJ|1|A|A|217
7CPJ|1|A|A|218
7CPJ|1|A|A|219
7CPJ|1|A|G|220
7CPJ|1|A|A|221
7CPJ|1|A|A|222
7CPJ|1|A|A|223
7CPJ|1|A|U|224
*
7CPJ|1|A|A|231
7CPJ|1|A|G|232
7CPJ|1|A|A|233
7CPJ|1|A|U|234
7CPJ|1|A|U|235
*
7CPJ|1|A|A|262
7CPJ|1|A|G|263
7CPJ|1|A|C|264
7CPJ|1|A|A|265
7CPJ|1|A|G|266
*
7CPJ|1|A|C|426
7CPJ|1|A|U|427
7CPJ|1|A|A|428
7CPJ|1|A|A|429
7CPJ|1|A|A|430
7CPJ|1|A|U|431
7CPJ|1|A|A|432
7CPJ|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34