J6_7JQL_001

3D structure

PDB id

7JQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

7JQL|1|1A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JQL|1|1A|G|44
7JQL|1|1A|C|45
*
7JQL|1|1A|G|179
7JQL|1|1A|G|180
7JQL|1|1A|A|181
7JQL|1|1A|A|182
7JQL|1|1A|C|183
*
7JQL|1|1A|G|214
7JQL|1|1A|G|215
7JQL|1|1A|A|216
7JQL|1|1A|G|217
7JQL|1|1A|A|218
7JQL|1|1A|G|219
7JQL|1|1A|G|220
7JQL|1|1A|A|221
7JQL|1|1A|A|222
7JQL|1|1A|A|223
7JQL|1|1A|G|224
*
7JQL|1|1A|C|231
7JQL|1|1A|G|232
7JQL|1|1A|A|233
7JQL|1|1A|C|234
7JQL|1|1A|U|235
*
7JQL|1|1A|A|262
7JQL|1|1A|C|263
7JQL|1|1A|C|264
7JQL|1|1A|A|265
7JQL|1|1A|G|266
*
7JQL|1|1A|C|426
7JQL|1|1A|U|427
7JQL|1|1A|A|428
7JQL|1|1A|A|429
7JQL|1|1A|G|430
7JQL|1|1A|U|431
7JQL|1|1A|A|432
7JQL|1|1A|C|433

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 17

50S ribosomal protein L34