J6_7JQM_002
3D structure
- PDB id
- 7JQM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GCCUAGUGAACC*GAUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 7JQM|1|1A|U|2076, 7JQM|1|1A|A|2388, 7JQM|1|1A|U|2390, 7JQM|1|1A|G|2428, 7JQM|1|1A|A|2430, 7JQM|1|1A|U|2431
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7JQM|1|1A|U|2074
7JQM|1|1A|U|2075
7JQM|1|1A|U|2076
7JQM|1|1A|A|2077
*
7JQM|1|1A|U|2243
7JQM|1|1A|U|2244
7JQM|1|1A|U|2245
7JQM|1|1A|G|2246
*
7JQM|1|1A|C|2258
7JQM|1|1A|G|2259
*
7JQM|1|1A|C|2281
7JQM|1|1A|G|2282
7JQM|1|1A|C|2283
7JQM|1|1A|C|2284
*
7JQM|1|1A|G|2384
7JQM|1|1A|C|2385
7JQM|1|1A|C|2386
7JQM|1|1A|U|2387
7JQM|1|1A|A|2388
7JQM|1|1A|G|2389
7JQM|1|1A|U|2390
7JQM|1|1A|G|2391
7JQM|1|1A|A|2392
7JQM|1|1A|A|2393
7JQM|1|1A|C|2394
7JQM|1|1A|C|2395
*
7JQM|1|1A|G|2421
7JQM|1|1A|A|2422
7JQM|1|1A|U|2423
7JQM|1|1A|C|2424
7JQM|1|1A|A|2425
7JQM|1|1A|A|2426
7JQM|1|1A|C|2427
7JQM|1|1A|G|2428
7JQM|1|1A|G|2429
7JQM|1|1A|A|2430
7JQM|1|1A|U|2431
7JQM|1|1A|A|2432
7JQM|1|1A|A|2433
7JQM|1|1A|A|2434
7JQM|1|1A|A|2435
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 10
- 50S ribosomal protein L27
- Chain 11
- 50S ribosomal protein L28
- Chain 16
- 50S ribosomal protein L33
- Chain 18
- 50S ribosomal protein L35
- Chain 1D
- 50S ribosomal protein L2
- Chain 1P
- 50S ribosomal protein L15
Coloring options: