3D structure

PDB id
7K53 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
Length
36 nucleotides
Bulged bases
7K53|1|1|A|223
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7K53|1|1|G|45
7K53|1|1|G|46
*
7K53|1|1|C|179
7K53|1|1|G|180
7K53|1|1|A|181
7K53|1|1|A|182
7K53|1|1|C|183
*
7K53|1|1|G|214
7K53|1|1|G|215
7K53|1|1|A|216
7K53|1|1|A|217
7K53|1|1|A|218
7K53|1|1|A|219
7K53|1|1|G|220
7K53|1|1|A|221
7K53|1|1|A|222
7K53|1|1|A|223
7K53|1|1|U|224
*
7K53|1|1|A|231
7K53|1|1|G|232
7K53|1|1|A|233
7K53|1|1|U|234
7K53|1|1|U|235
*
7K53|1|1|A|262
7K53|1|1|G|263
7K53|1|1|C|264
7K53|1|1|A|265
7K53|1|1|G|266
*
7K53|1|1|C|426
7K53|1|1|U|427
7K53|1|1|A|428
7K53|1|1|A|429
7K53|1|1|A|430
7K53|1|1|U|431
7K53|1|1|A|432
7K53|1|1|C|433

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain D
50S ribosomal protein L34

Coloring options:

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