J6_7KGB_001

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GC*GGAAC*GGAGGAGAAAA*UGAUU*AACAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7KGB|1|A|A|225

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7KGB|1|A|G|45
7KGB|1|A|C|46
*
7KGB|1|A|G|181
7KGB|1|A|G|182
7KGB|1|A|A|183
7KGB|1|A|A|184
7KGB|1|A|C|185
*
7KGB|1|A|G|216
7KGB|1|A|G|217
7KGB|1|A|A|218
7KGB|1|A|G|219
7KGB|1|A|G|220
7KGB|1|A|A|221
7KGB|1|A|G|222
7KGB|1|A|A|223
7KGB|1|A|A|224
7KGB|1|A|A|225
7KGB|1|A|A|226
*
7KGB|1|A|U|233
7KGB|1|A|G|234
7KGB|1|A|A|235
7KGB|1|A|U|236
7KGB|1|A|U|237
*
7KGB|1|A|A|264
7KGB|1|A|A|265
7KGB|1|A|C|266
7KGB|1|A|A|267
7KGB|1|A|G|268
*
7KGB|1|A|C|515
7KGB|1|A|U|516
7KGB|1|A|A|517
7KGB|1|A|A|518
7KGB|1|A|A|519
7KGB|1|A|U|520
7KGB|1|A|A|521
7KGB|1|A|C|522

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34