J6_7KGB_002
3D structure
- PDB id
- 7KGB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUCA*UUUA*UG*CGCC*GAUUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 7KGB|1|A|C|2313, 7KGB|1|A|U|2628, 7KGB|1|A|G|2666, 7KGB|1|A|A|2668, 7KGB|1|A|U|2669
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7KGB|1|A|U|2311
7KGB|1|A|U|2312
7KGB|1|A|C|2313
7KGB|1|A|A|2314
*
7KGB|1|A|U|2481
7KGB|1|A|U|2482
7KGB|1|A|U|2483
7KGB|1|A|A|2484
*
7KGB|1|A|U|2496
7KGB|1|A|G|2497
*
7KGB|1|A|C|2519
7KGB|1|A|G|2520
7KGB|1|A|C|2521
7KGB|1|A|C|2522
*
7KGB|1|A|G|2622
7KGB|1|A|A|2623
7KGB|1|A|U|2624
7KGB|1|A|U|2625
7KGB|1|A|A|2626
7KGB|1|A|G|2627
7KGB|1|A|U|2628
7KGB|1|A|G|2629
7KGB|1|A|A|2630
7KGB|1|A|U|2631
7KGB|1|A|C|2632
7KGB|1|A|C|2633
*
7KGB|1|A|G|2659
7KGB|1|A|C|2660
7KGB|1|A|U|2661
7KGB|1|A|C|2662
7KGB|1|A|A|2663
7KGB|1|A|A|2664
7KGB|1|A|C|2665
7KGB|1|A|G|2666
7KGB|1|A|G|2667
7KGB|1|A|A|2668
7KGB|1|A|U|2669
7KGB|1|A|A|2670
7KGB|1|A|A|2671
7KGB|1|A|A|2672
7KGB|1|A|A|2673
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L33 2
- Chain 3
- 50S ribosomal protein L35
- Chain C
- 50S ribosomal protein L2
- Chain L
- 50S ribosomal protein L15
- Chain W
- 50S ribosomal protein L27
- Chain X
- 50S ribosomal protein L28
Coloring options: