3D structure

PDB id
7L08 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.49 Å

Loop

Sequence
UUUA*UUCG*CU*AGCA*UCAAUUGAUCC*GACCAACGGAACAA
Length
39 nucleotides
Bulged bases
7L08|1|A|U|2739, 7L08|1|A|U|2895, 7L08|1|A|G|2916, 7L08|1|A|A|2918
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7L08|1|A|U|2737
7L08|1|A|U|2738
7L08|1|A|U|2739
7L08|1|A|A|2740
*
7L08|1|A|U|2807
7L08|1|A|U|2808
7L08|1|A|C|2809
7L08|1|A|G|2810
*
7L08|1|A|C|2822
7L08|1|A|U|2823
*
7L08|1|A|A|2845
7L08|1|A|G|2846
7L08|1|A|C|2847
7L08|1|A|A|2848
*
7L08|1|A|U|2890
7L08|1|A|C|2891
7L08|1|A|A|2892
7L08|1|A|A|2893
7L08|1|A|U|2894
7L08|1|A|U|2895
7L08|1|A|G|2896
7L08|1|A|A|2897
7L08|1|A|U|2898
7L08|1|A|C|2899
7L08|1|A|C|2900
*
7L08|1|A|G|2909
7L08|1|A|A|2910
7L08|1|A|C|2911
7L08|1|A|C|2912
7L08|1|A|A|2913
7L08|1|A|A|2914
7L08|1|A|C|2915
7L08|1|A|G|2916
7L08|1|A|G|2917
7L08|1|A|A|2918
7L08|1|A|A|2919
7L08|1|A|C|2920
7L08|1|A|A|2921
7L08|1|A|A|2922

Current chains

Chain A
16S RRNA

Nearby chains

Chain 1
39S ribosomal protein L33, mitochondrial
Chain 3
39S ribosomal protein L35, mitochondrial
Chain D
39S ribosomal protein L2, mitochondrial
Chain M
39S ribosomal protein L15, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain X
39S ribosomal protein L28, mitochondrial

Coloring options:

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