J6_7LH5_003

3D structure

PDB id

7LH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

3.27 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

7LH5|1|DA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LH5|1|DA|G|44
7LH5|1|DA|C|45
*
7LH5|1|DA|G|179
7LH5|1|DA|G|180
7LH5|1|DA|A|181
7LH5|1|DA|A|182
7LH5|1|DA|C|183
*
7LH5|1|DA|G|214
7LH5|1|DA|G|215
7LH5|1|DA|A|216
7LH5|1|DA|G|217
7LH5|1|DA|A|218
7LH5|1|DA|G|219
7LH5|1|DA|G|220
7LH5|1|DA|A|221
7LH5|1|DA|A|222
7LH5|1|DA|A|223
7LH5|1|DA|G|224
*
7LH5|1|DA|C|231
7LH5|1|DA|G|232
7LH5|1|DA|A|233
7LH5|1|DA|C|234
7LH5|1|DA|U|235
*
7LH5|1|DA|A|262
7LH5|1|DA|C|263
7LH5|1|DA|C|264
7LH5|1|DA|A|265
7LH5|1|DA|G|266
*
7LH5|1|DA|C|426
7LH5|1|DA|U|427
7LH5|1|DA|A|428
7LH5|1|DA|A|429
7LH5|1|DA|G|430
7LH5|1|DA|U|431
7LH5|1|DA|A|432
7LH5|1|DA|C|433

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D7

50S ribosomal protein L34