J6_7LS1_002
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG
- Length
- 27 nucleotides
- Bulged bases
- 7LS1|1|A2|C|1314, 7LS1|1|A2|G|1315
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7LS1|1|A2|C|1166
7LS1|1|A2|G|1167
7LS1|1|A2|A|1168
7LS1|1|A2|G|1169
*
7LS1|1|A2|C|1198
7LS1|1|A2|G|1199
7LS1|1|A2|C|1200
7LS1|1|A2|A|1201
7LS1|1|A2|A|1202
*
7LS1|1|A2|U|1209
7LS1|1|A2|G|1210
7LS1|1|A2|A|1211
7LS1|1|A2|A|1212
7LS1|1|A2|G|1213
*
7LS1|1|A2|C|1231
7LS1|1|A2|G|1232
7LS1|1|A2|A|1233
7LS1|1|A2|G|1234
*
7LS1|1|A2|C|1277
7LS1|1|A2|G|1278
7LS1|1|A2|G|1279
*
7LS1|1|A2|C|1312
7LS1|1|A2|A|1313
7LS1|1|A2|C|1314
7LS1|1|A2|G|1315
7LS1|1|A2|A|1316
7LS1|1|A2|G|1317
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain F1
- 60S ribosomal protein L13
- Chain F2
- 60S ribosomal protein L4
- Chain K2
- 60S ribosomal protein L18
- Chain N2
- 60S ribosomal protein L21
- Chain U2
- 60S ribosomal protein L27a
- Chain V2
- 60S ribosomal protein L29
- Chain c2
- 60S ribosomal protein L36
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