J6_7LV0_002

3D structure

PDB id

7LV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUUA*UUUG*CU*AGCA*UCAUAGUGAUCC*GCUCAACGGAUAAAA

Length

41 nucleotides

Bulged bases

7LV0|1|1|U|2076, 7LV0|1|1|A|2388, 7LV0|1|1|U|2390, 7LV0|1|1|G|2428, 7LV0|1|1|A|2430

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LV0|1|1|U|2074
7LV0|1|1|U|2075
7LV0|1|1|U|2076
7LV0|1|1|A|2077
*
7LV0|1|1|U|2243
7LV0|1|1|U|2244
7LV0|1|1|U|2245
7LV0|1|1|G|2246
*
7LV0|1|1|C|2258
7LV0|1|1|U|2259
*
7LV0|1|1|A|2281
7LV0|1|1|G|2282
7LV0|1|1|C|2283
7LV0|1|1|A|2284
*
7LV0|1|1|U|2384
7LV0|1|1|C|2385
7LV0|1|1|A|2386
7LV0|1|1|U|2387
7LV0|1|1|A|2388
7LV0|1|1|G|2389
7LV0|1|1|U|2390
7LV0|1|1|G|2391
7LV0|1|1|A|2392
7LV0|1|1|U|2393
7LV0|1|1|C|2394
7LV0|1|1|C|2395
*
7LV0|1|1|G|2421
7LV0|1|1|C|2422
7LV0|1|1|U|2423
7LV0|1|1|C|2424
7LV0|1|1|A|2425
7LV0|1|1|A|2426
7LV0|1|1|C|2427
7LV0|1|1|G|2428
7LV0|1|1|G|2429
7LV0|1|1|A|2430
7LV0|1|1|U|2431
7LV0|1|1|A|2432
7LV0|1|1|A|2433
7LV0|1|1|A|2434
7LV0|1|1|A|2435

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 6

Transfer RNA; tRNA

Chain C

50S ribosomal protein L33

Chain E

50S ribosomal protein L35

Chain b

50S ribosomal protein L2

Chain l

50S ribosomal protein L15

Chain w

50S ribosomal protein L27

Chain x

50S ribosomal protein L28