J6_7M4V_001

3D structure

PDB id

7M4V (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 50S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AUCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7M4V|1|A|A|230

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7M4V|1|A|G|52
7M4V|1|A|G|53
*
7M4V|1|A|C|186
7M4V|1|A|G|187
7M4V|1|A|A|188
7M4V|1|A|A|189
7M4V|1|A|C|190
*
7M4V|1|A|G|221
7M4V|1|A|G|222
7M4V|1|A|A|223
7M4V|1|A|A|224
7M4V|1|A|A|225
7M4V|1|A|A|226
7M4V|1|A|G|227
7M4V|1|A|A|228
7M4V|1|A|A|229
7M4V|1|A|A|230
7M4V|1|A|U|231
*
7M4V|1|A|A|238
7M4V|1|A|G|239
7M4V|1|A|A|240
7M4V|1|A|U|241
7M4V|1|A|U|242
*
7M4V|1|A|A|269
7M4V|1|A|U|270
7M4V|1|A|C|271
7M4V|1|A|A|272
7M4V|1|A|G|273
*
7M4V|1|A|C|425
7M4V|1|A|U|426
7M4V|1|A|A|427
7M4V|1|A|A|428
7M4V|1|A|A|429
7M4V|1|A|U|430
7M4V|1|A|A|431
7M4V|1|A|C|432

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34