3D structure

PDB id
7MT2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70S initiation complex
Experimental method
ELECTRON MICROSCOPY
Resolution
2.76 Å

Loop

Sequence
UUCAC*GUUUAA*UUG*CGCC*GAUUAGUGAUCC*GCUCAACGGAUAAAA
Length
45 nucleotides
Bulged bases
7MT2|1|A|C|2313, 7MT2|1|A|A|2626, 7MT2|1|A|G|2666, 7MT2|1|A|A|2668, 7MT2|1|A|U|2669
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7MT2|1|A|U|2311
7MT2|1|A|U|2312
7MT2|1|A|C|2313
7MT2|1|A|A|2314
7MT2|1|A|C|2315
*
7MT2|1|A|G|2480
7MT2|1|A|U|2481
7MT2|1|A|U|2482
7MT2|1|A|U|2483
7MT2|1|A|A|2484
7MT2|1|A|A|2485
*
7MT2|1|A|U|2495
7MT2|1|A|U|2496
7MT2|1|A|G|2497
*
7MT2|1|A|C|2519
7MT2|1|A|G|2520
7MT2|1|A|C|2521
7MT2|1|A|C|2522
*
7MT2|1|A|G|2622
7MT2|1|A|A|2623
7MT2|1|A|U|2624
7MT2|1|A|U|2625
7MT2|1|A|A|2626
7MT2|1|A|G|2627
7MT2|1|A|U|2628
7MT2|1|A|G|2629
7MT2|1|A|A|2630
7MT2|1|A|U|2631
7MT2|1|A|C|2632
7MT2|1|A|C|2633
*
7MT2|1|A|G|2659
7MT2|1|A|C|2660
7MT2|1|A|U|2661
7MT2|1|A|C|2662
7MT2|1|A|A|2663
7MT2|1|A|A|2664
7MT2|1|A|C|2665
7MT2|1|A|G|2666
7MT2|1|A|G|2667
7MT2|1|A|A|2668
7MT2|1|A|U|2669
7MT2|1|A|A|2670
7MT2|1|A|A|2671
7MT2|1|A|A|2672
7MT2|1|A|A|2673

Current chains

Chain A
23S rRNA

Nearby chains

Chain 1
50S ribosomal protein L33 2
Chain 3
50S ribosomal protein L35
Chain C
50S ribosomal protein L2
Chain L
50S ribosomal protein L15
Chain W
50S ribosomal protein L27
Chain X
50S ribosomal protein L28
Chain y
Transfer RNA; tRNA

Coloring options:

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