J6_7NHK_002
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GCUUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 7NHK|1|A|U|2089, 7NHK|1|A|A|2401, 7NHK|1|A|U|2403, 7NHK|1|A|G|2441, 7NHK|1|A|A|2443, 7NHK|1|A|U|2444
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NHK|1|A|U|2087
7NHK|1|A|U|2088
7NHK|1|A|U|2089
7NHK|1|A|A|2090
*
7NHK|1|A|U|2256
7NHK|1|A|U|2257
7NHK|1|A|U|2258
7NHK|1|A|G|2259
*
7NHK|1|A|C|2271
7NHK|1|A|G|2272
*
7NHK|1|A|C|2294
7NHK|1|A|G|2295
7NHK|1|A|C|2296
7NHK|1|A|C|2297
*
7NHK|1|A|G|2397
7NHK|1|A|C|2398
7NHK|1|A|U|2399
7NHK|1|A|U|2400
7NHK|1|A|A|2401
7NHK|1|A|G|2402
7NHK|1|A|U|2403
7NHK|1|A|G|2404
7NHK|1|A|A|2405
7NHK|1|A|U|2406
7NHK|1|A|C|2407
7NHK|1|A|C|2408
*
7NHK|1|A|G|2434
7NHK|1|A|C|2435
7NHK|1|A|U|2436
7NHK|1|A|C|2437
7NHK|1|A|A|2438
7NHK|1|A|A|2439
7NHK|1|A|C|2440
7NHK|1|A|G|2441
7NHK|1|A|G|2442
7NHK|1|A|A|2443
7NHK|1|A|U|2444
7NHK|1|A|A|2445
7NHK|1|A|A|2446
7NHK|1|A|A|2447
7NHK|1|A|A|2448
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- ABC-F type ribosomal protection protein Lsa(A)
- Chain 5
- 50S ribosomal protein L33
- Chain 7
- 50S ribosomal protein L35
- Chain G
- 50S ribosomal protein L2
- Chain O
- 50S ribosomal protein L15
- Chain Y
- 50S ribosomal protein L27
- Chain Z
- 50S ribosomal protein L28
Coloring options: