J6_7NHM_002
3D structure
- PDB id
- 7NHM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCU*ACUUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 7NHM|1|A|U|2103, 7NHM|1|A|A|2415, 7NHM|1|A|U|2417, 7NHM|1|A|G|2455, 7NHM|1|A|A|2457, 7NHM|1|A|U|2458
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NHM|1|A|U|2101
7NHM|1|A|U|2102
7NHM|1|A|U|2103
7NHM|1|A|A|2104
*
7NHM|1|A|U|2270
7NHM|1|A|U|2271
7NHM|1|A|U|2272
7NHM|1|A|G|2273
*
7NHM|1|A|C|2285
7NHM|1|A|G|2286
*
7NHM|1|A|C|2308
7NHM|1|A|G|2309
7NHM|1|A|C|2310
7NHM|1|A|U|2311
*
7NHM|1|A|A|2411
7NHM|1|A|C|2412
7NHM|1|A|U|2413
7NHM|1|A|U|2414
7NHM|1|A|A|2415
7NHM|1|A|G|2416
7NHM|1|A|U|2417
7NHM|1|A|G|2418
7NHM|1|A|A|2419
7NHM|1|A|U|2420
7NHM|1|A|C|2421
7NHM|1|A|C|2422
*
7NHM|1|A|G|2448
7NHM|1|A|C|2449
7NHM|1|A|U|2450
7NHM|1|A|C|2451
7NHM|1|A|A|2452
7NHM|1|A|A|2453
7NHM|1|A|C|2454
7NHM|1|A|G|2455
7NHM|1|A|G|2456
7NHM|1|A|A|2457
7NHM|1|A|U|2458
7NHM|1|A|A|2459
7NHM|1|A|A|2460
7NHM|1|A|A|2461
7NHM|1|A|A|2462
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L28
- Chain 6
- 50S ribosomal protein L33 2
- Chain 8
- 50S ribosomal protein L35
- Chain G
- 50S ribosomal protein L2
- Chain O
- 50S ribosomal protein L15
- Chain Z
- 50S ribosomal protein L27
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