J6_7OID_001
3D structure
- PDB id
- 7OID (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AGAUAG*CAA*UUAG*CACUA*UUGUAG*CACACCCAAU
- Length
- 34 nucleotides
- Bulged bases
- 7OID|1|A|A|427, 7OID|1|A|C|592
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OID|1|A|A|357
7OID|1|A|G|358
7OID|1|A|A|359
7OID|1|A|U|360
7OID|1|A|A|361
7OID|1|A|G|362
*
7OID|1|A|C|373
7OID|1|A|A|374
7OID|1|A|A|375
*
7OID|1|A|U|425
7OID|1|A|U|426
7OID|1|A|A|427
7OID|1|A|G|428
*
7OID|1|A|C|453
7OID|1|A|A|454
7OID|1|A|C|455
7OID|1|A|U|456
7OID|1|A|A|457
*
7OID|1|A|U|468
7OID|1|A|U|469
7OID|1|A|G|470
7OID|1|A|U|471
7OID|1|A|A|472
7OID|1|A|G|473
*
7OID|1|A|C|587
7OID|1|A|A|588
7OID|1|A|C|589
7OID|1|A|A|590
7OID|1|A|C|591
7OID|1|A|C|592
7OID|1|A|C|593
7OID|1|A|A|594
7OID|1|A|A|595
7OID|1|A|U|596
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain I
- 39S ribosomal protein L10, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain S
- 39S ribosomal protein L21, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain Z
- 39S ribosomal protein L30, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
- Chain j
- 39S ribosomal protein L52, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
Coloring options: