3D structure

PDB id
7OII (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-70 cotranslational folding intermediate 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
Length
36 nucleotides
Bulged bases
7OII|1|1|A|223
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OII|1|1|G|45
7OII|1|1|G|46
*
7OII|1|1|C|179
7OII|1|1|G|180
7OII|1|1|A|181
7OII|1|1|A|182
7OII|1|1|C|183
*
7OII|1|1|G|214
7OII|1|1|G|215
7OII|1|1|A|216
7OII|1|1|A|217
7OII|1|1|A|218
7OII|1|1|A|219
7OII|1|1|G|220
7OII|1|1|A|221
7OII|1|1|A|222
7OII|1|1|A|223
7OII|1|1|U|224
*
7OII|1|1|A|231
7OII|1|1|G|232
7OII|1|1|A|233
7OII|1|1|U|234
7OII|1|1|U|235
*
7OII|1|1|A|262
7OII|1|1|G|263
7OII|1|1|C|264
7OII|1|1|A|265
7OII|1|1|G|266
*
7OII|1|1|C|426
7OII|1|1|U|427
7OII|1|1|A|428
7OII|1|1|A|429
7OII|1|1|A|430
7OII|1|1|U|431
7OII|1|1|A|432
7OII|1|1|C|433

Current chains

Chain 1
23S rRNA

Nearby chains

Chain c
50S ribosomal protein L34

Coloring options:

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