J6_7OIZ_001

3D structure

PDB id

7OIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7OIZ|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OIZ|1|a|G|45
7OIZ|1|a|G|46
*
7OIZ|1|a|C|179
7OIZ|1|a|G|180
7OIZ|1|a|A|181
7OIZ|1|a|A|182
7OIZ|1|a|C|183
*
7OIZ|1|a|G|214
7OIZ|1|a|G|215
7OIZ|1|a|A|216
7OIZ|1|a|A|217
7OIZ|1|a|A|218
7OIZ|1|a|A|219
7OIZ|1|a|G|220
7OIZ|1|a|A|221
7OIZ|1|a|A|222
7OIZ|1|a|A|223
7OIZ|1|a|U|224
*
7OIZ|1|a|A|231
7OIZ|1|a|G|232
7OIZ|1|a|A|233
7OIZ|1|a|U|234
7OIZ|1|a|U|235
*
7OIZ|1|a|A|262
7OIZ|1|a|G|263
7OIZ|1|a|C|264
7OIZ|1|a|A|265
7OIZ|1|a|G|266
*
7OIZ|1|a|C|426
7OIZ|1|a|U|427
7OIZ|1|a|A|428
7OIZ|1|a|A|429
7OIZ|1|a|A|430
7OIZ|1|a|U|431
7OIZ|1|a|A|432
7OIZ|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L34