J6_7P3K_001

3D structure

PDB id

7P3K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7P3K|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7P3K|1|a|G|45
7P3K|1|a|G|46
*
7P3K|1|a|C|179
7P3K|1|a|G|180
7P3K|1|a|A|181
7P3K|1|a|A|182
7P3K|1|a|C|183
*
7P3K|1|a|G|214
7P3K|1|a|G|215
7P3K|1|a|A|216
7P3K|1|a|A|217
7P3K|1|a|A|218
7P3K|1|a|A|219
7P3K|1|a|G|220
7P3K|1|a|A|221
7P3K|1|a|A|222
7P3K|1|a|A|223
7P3K|1|a|U|224
*
7P3K|1|a|A|231
7P3K|1|a|G|232
7P3K|1|a|A|233
7P3K|1|a|U|234
7P3K|1|a|U|235
*
7P3K|1|a|A|262
7P3K|1|a|G|263
7P3K|1|a|C|264
7P3K|1|a|A|265
7P3K|1|a|G|266
*
7P3K|1|a|C|426
7P3K|1|a|U|427
7P3K|1|a|A|428
7P3K|1|a|A|429
7P3K|1|a|A|430
7P3K|1|a|U|431
7P3K|1|a|A|432
7P3K|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L34