J6_7P48_001
3D structure
- PDB id
- 7P48 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus ribosome in complex with Sal(B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCC*GGCACAC*GGAAGAGAAAG*CGAUU*AAGAG*CUAAAUAC
- Length
- 39 nucleotides
- Bulged bases
- 7P48|1|A|C|184, 7P48|1|A|A|226
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7P48|1|A|G|45
7P48|1|A|C|46
7P48|1|A|C|47
*
7P48|1|A|G|180
7P48|1|A|G|181
7P48|1|A|C|182
7P48|1|A|A|183
7P48|1|A|C|184
7P48|1|A|A|185
7P48|1|A|C|186
*
7P48|1|A|G|217
7P48|1|A|G|218
7P48|1|A|A|219
7P48|1|A|A|220
7P48|1|A|G|221
7P48|1|A|A|222
7P48|1|A|G|223
7P48|1|A|A|224
7P48|1|A|A|225
7P48|1|A|A|226
7P48|1|A|G|227
*
7P48|1|A|C|234
7P48|1|A|G|235
7P48|1|A|A|236
7P48|1|A|U|237
7P48|1|A|U|238
*
7P48|1|A|A|265
7P48|1|A|A|266
7P48|1|A|G|267
7P48|1|A|A|268
7P48|1|A|G|269
*
7P48|1|A|C|472
7P48|1|A|U|473
7P48|1|A|A|474
7P48|1|A|A|475
7P48|1|A|A|476
7P48|1|A|U|477
7P48|1|A|A|478
7P48|1|A|C|479
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
Coloring options: