J6_7PJS_001

3D structure

PDB id

7PJS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7PJS|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJS|1|A|G|45
7PJS|1|A|G|46
*
7PJS|1|A|C|179
7PJS|1|A|G|180
7PJS|1|A|A|181
7PJS|1|A|A|182
7PJS|1|A|C|183
*
7PJS|1|A|G|214
7PJS|1|A|G|215
7PJS|1|A|A|216
7PJS|1|A|A|217
7PJS|1|A|A|218
7PJS|1|A|A|219
7PJS|1|A|G|220
7PJS|1|A|A|221
7PJS|1|A|A|222
7PJS|1|A|A|223
7PJS|1|A|U|224
*
7PJS|1|A|A|231
7PJS|1|A|G|232
7PJS|1|A|A|233
7PJS|1|A|U|234
7PJS|1|A|U|235
*
7PJS|1|A|A|262
7PJS|1|A|G|263
7PJS|1|A|C|264
7PJS|1|A|A|265
7PJS|1|A|G|266
*
7PJS|1|A|C|426
7PJS|1|A|U|427
7PJS|1|A|A|428
7PJS|1|A|A|429
7PJS|1|A|A|430
7PJS|1|A|U|431
7PJS|1|A|A|432
7PJS|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34