J6_7PJV_001

3D structure

PDB id

7PJV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7PJV|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJV|1|A|G|45
7PJV|1|A|G|46
*
7PJV|1|A|C|179
7PJV|1|A|G|180
7PJV|1|A|A|181
7PJV|1|A|A|182
7PJV|1|A|C|183
*
7PJV|1|A|G|214
7PJV|1|A|G|215
7PJV|1|A|A|216
7PJV|1|A|A|217
7PJV|1|A|A|218
7PJV|1|A|A|219
7PJV|1|A|G|220
7PJV|1|A|A|221
7PJV|1|A|A|222
7PJV|1|A|A|223
7PJV|1|A|U|224
*
7PJV|1|A|A|231
7PJV|1|A|G|232
7PJV|1|A|A|233
7PJV|1|A|U|234
7PJV|1|A|U|235
*
7PJV|1|A|A|262
7PJV|1|A|G|263
7PJV|1|A|C|264
7PJV|1|A|A|265
7PJV|1|A|G|266
*
7PJV|1|A|C|426
7PJV|1|A|U|427
7PJV|1|A|A|428
7PJV|1|A|A|429
7PJV|1|A|A|430
7PJV|1|A|U|431
7PJV|1|A|A|432
7PJV|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34