J6_7PJX_001

3D structure

PDB id

7PJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7PJX|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJX|1|A|G|45
7PJX|1|A|G|46
*
7PJX|1|A|C|179
7PJX|1|A|G|180
7PJX|1|A|A|181
7PJX|1|A|A|182
7PJX|1|A|C|183
*
7PJX|1|A|G|214
7PJX|1|A|G|215
7PJX|1|A|A|216
7PJX|1|A|A|217
7PJX|1|A|A|218
7PJX|1|A|A|219
7PJX|1|A|G|220
7PJX|1|A|A|221
7PJX|1|A|A|222
7PJX|1|A|A|223
7PJX|1|A|U|224
*
7PJX|1|A|A|231
7PJX|1|A|G|232
7PJX|1|A|A|233
7PJX|1|A|U|234
7PJX|1|A|U|235
*
7PJX|1|A|A|262
7PJX|1|A|G|263
7PJX|1|A|C|264
7PJX|1|A|A|265
7PJX|1|A|G|266
*
7PJX|1|A|C|426
7PJX|1|A|U|427
7PJX|1|A|A|428
7PJX|1|A|A|429
7PJX|1|A|A|430
7PJX|1|A|U|431
7PJX|1|A|A|432
7PJX|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34