J6_7PZY_002
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- UUGA*UUUG*CA*UGUC*GCCUAUCGAUCC*(OMG)GUGCCAGAAAA
- Length
- 38 nucleotides
- Bulged bases
- 7PZY|1|1|G|2396, 7PZY|1|1|C|2732, 7PZY|1|1|A|2771, 7PZY|1|1|A|2773, 7PZY|1|1|A|2774
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PZY|1|1|U|2394
7PZY|1|1|U|2395
7PZY|1|1|G|2396
7PZY|1|1|A|2397
*
7PZY|1|1|U|2583
7PZY|1|1|U|2584
7PZY|1|1|U|2585
7PZY|1|1|G|2586
*
7PZY|1|1|C|2599
7PZY|1|1|A|2600
*
7PZY|1|1|U|2622
7PZY|1|1|G|2623
7PZY|1|1|U|2624
7PZY|1|1|C|2625
*
7PZY|1|1|G|2726
7PZY|1|1|C|2727
7PZY|1|1|C|2728
7PZY|1|1|U|2729
7PZY|1|1|A|2730
7PZY|1|1|U|2731
7PZY|1|1|C|2732
7PZY|1|1|G|2733
7PZY|1|1|A|2734
7PZY|1|1|U|2735
7PZY|1|1|C|2736
7PZY|1|1|C|2737
*
7PZY|1|1|OMG|2765
7PZY|1|1|G|2766
7PZY|1|1|U|2767
7PZY|1|1|G|2768
7PZY|1|1|C|2769
7PZY|1|1|C|2770
7PZY|1|1|A|2771
7PZY|1|1|G|2772
7PZY|1|1|A|2773
7PZY|1|1|A|2774
7PZY|1|1|A|2775
7PZY|1|1|A|2776
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 10
- Transfer RNA; tRNA
- Chain 2
- Ribosomal 60S subunit protein L21A
- Chain AB
- Ribosomal 60S subunit protein L28
- Chain AC
- 60S ribosomal protein L29
- Chain AP
- Ribosomal 60S subunit protein L42A
- Chain j
- Ribosomal 60S subunit protein L2A
- Chain v
- Ribosomal protein L15
- Chain y
- Ribosomal 60S subunit protein L18A
Coloring options: