J6_7Q0F_001
3D structure
- PDB id
- 7Q0F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with phyllanthoside
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- GACUAC*GGAAAAGAAAC*GGAUU*AAAAG*CUAAAUAUUGG*CAUC
- Length
- 42 nucleotides
- Bulged bases
- 7Q0F|1|1|A|66, 7Q0F|1|1|U|329, 7Q0F|1|4|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7Q0F|1|1|G|21
7Q0F|1|1|A|22
7Q0F|1|1|C|23
7Q0F|1|1|U|24
7Q0F|1|1|A|25
7Q0F|1|1|C|26
*
7Q0F|1|1|G|57
7Q0F|1|1|G|58
7Q0F|1|1|A|59
7Q0F|1|1|A|60
7Q0F|1|1|A|61
7Q0F|1|1|A|62
7Q0F|1|1|G|63
7Q0F|1|1|A|64
7Q0F|1|1|A|65
7Q0F|1|1|A|66
7Q0F|1|1|C|67
*
7Q0F|1|1|G|74
7Q0F|1|1|G|75
7Q0F|1|1|A|76
7Q0F|1|1|U|77
7Q0F|1|1|U|78
*
7Q0F|1|1|A|105
7Q0F|1|1|A|106
7Q0F|1|1|A|107
7Q0F|1|1|A|108
7Q0F|1|1|G|109
*
7Q0F|1|1|C|321
7Q0F|1|1|U|322
7Q0F|1|1|A|323
7Q0F|1|1|A|324
7Q0F|1|1|A|325
7Q0F|1|1|U|326
7Q0F|1|1|A|327
7Q0F|1|1|U|328
7Q0F|1|1|U|329
7Q0F|1|1|G|330
7Q0F|1|1|G|331
*
7Q0F|1|4|C|32
7Q0F|1|4|A|33
7Q0F|1|4|U|34
7Q0F|1|4|C|35
Current chains
- Chain 1
- 25S ribosomal RNA
- Chain 4
- 5.8S ribosomal RNA
Nearby chains
- Chain AI
- Ribosomal 60S subunit protein L35A
- Chain AJ
- 60S ribosomal protein L36
- Chain AK
- Ribosomal protein L37
- Chain l
- Ribosomal 60S subunit protein L4B
- Chain t
- 60S ribosomal protein L13
- Chain v
- Ribosomal protein L15
Coloring options: