J6_7Q4K_001

3D structure

PDB id

7Q4K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7Q4K|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7Q4K|1|BA|G|45
7Q4K|1|BA|G|46
*
7Q4K|1|BA|C|179
7Q4K|1|BA|G|180
7Q4K|1|BA|A|181
7Q4K|1|BA|A|182
7Q4K|1|BA|C|183
*
7Q4K|1|BA|G|214
7Q4K|1|BA|G|215
7Q4K|1|BA|A|216
7Q4K|1|BA|A|217
7Q4K|1|BA|A|218
7Q4K|1|BA|A|219
7Q4K|1|BA|G|220
7Q4K|1|BA|A|221
7Q4K|1|BA|A|222
7Q4K|1|BA|A|223
7Q4K|1|BA|U|224
*
7Q4K|1|BA|A|231
7Q4K|1|BA|G|232
7Q4K|1|BA|A|233
7Q4K|1|BA|U|234
7Q4K|1|BA|U|235
*
7Q4K|1|BA|A|262
7Q4K|1|BA|G|263
7Q4K|1|BA|C|264
7Q4K|1|BA|A|265
7Q4K|1|BA|G|266
*
7Q4K|1|BA|C|426
7Q4K|1|BA|U|427
7Q4K|1|BA|A|428
7Q4K|1|BA|A|429
7Q4K|1|BA|A|430
7Q4K|1|BA|U|431
7Q4K|1|BA|A|432
7Q4K|1|BA|C|433

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B2

50S ribosomal protein L34