J6_7RQC_003

3D structure

PDB id

7RQC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

7RQC|1|2A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7RQC|1|2A|G|44
7RQC|1|2A|C|45
*
7RQC|1|2A|G|179
7RQC|1|2A|G|180
7RQC|1|2A|A|181
7RQC|1|2A|A|182
7RQC|1|2A|C|183
*
7RQC|1|2A|G|214
7RQC|1|2A|G|215
7RQC|1|2A|A|216
7RQC|1|2A|G|217
7RQC|1|2A|A|218
7RQC|1|2A|G|219
7RQC|1|2A|G|220
7RQC|1|2A|A|221
7RQC|1|2A|A|222
7RQC|1|2A|A|223
7RQC|1|2A|G|224
*
7RQC|1|2A|C|231
7RQC|1|2A|G|232
7RQC|1|2A|A|233
7RQC|1|2A|C|234
7RQC|1|2A|U|235
*
7RQC|1|2A|A|262
7RQC|1|2A|C|263
7RQC|1|2A|C|264
7RQC|1|2A|A|265
7RQC|1|2A|G|266
*
7RQC|1|2A|C|426
7RQC|1|2A|U|427
7RQC|1|2A|A|428
7RQC|1|2A|A|429
7RQC|1|2A|G|430
7RQC|1|2A|U|431
7RQC|1|2A|A|432
7RQC|1|2A|C|433

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 27

50S ribosomal protein L34